Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00073 and BPUM_0023
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence dna-align/BSNT_00073___yabD.1.24716.seq
# -bsequence dna-align/BPUM_0023___yabD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00073___yabD-BPUM_0023___yabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00073___yabD-BPUM_0023___yabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00073___yabD
# 2: BPUM_0023___yabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity: 596/781 (76.3%)
# Similarity: 596/781 (76.3%)
# Gaps: 26/781 ( 3.3%)
# Score: 2198.0
#
#
#=======================================
BSNT_00073___ 1 ATGTTGTTTGACACTCACGCGCATTTAAATGCAGAACAATATGAT----A 46
|||||.|||||.||.||.||.||.||||||||||||||||||.|| |
BPUM_0023___y 1 ATGTTATTTGATACACATGCCCACTTAAATGCAGAACAATATAATGAAGA 50
BSNT_00073___ 47 CTGATCTGGATGAGGTTATTGAACGGGC-AAAAGCTGAAAAAGTTGAACG 95
|| |.||..||||.||||||.|.|| ||.|| |||||||||.|||..
BPUM_0023___y 51 CT----TAGAGCAGGTGATTGAAAGAGCGAAGAG-TGAAAAAGTCGAAAA 95
BSNT_00073___ 96 AATTGTCGTAGTTGGTTTTGACCGTCCGACGATTACCCGTGCGATGGAAA 145
|||.||.||.||.||.||||||||.|||||.|||||..|.|||||||||.
BPUM_0023___y 96 AATCGTGGTGGTAGGGTTTGACCGCCCGACAATTACGAGAGCGATGGAAT 145
BSNT_00073___ 146 TGATTGAGGAATATGATTTTATTTATGCAGCCATTGGCTGGCACCCTGTT 195
|.|||||.|..||||||||.||.|||||||||||||||||||||||.||.
BPUM_0023___y 146 TAATTGAAGCGTATGATTTCATCTATGCAGCCATTGGCTGGCACCCAGTC 195
BSNT_00073___ 196 GACGCTATTGACATGACAGAGGAAGACTTAGC-GTGGATTAAAGAGCTTT 244
|||||.|||||.||||||||.||||| ||.|| .|||||.|||||..|.|
BPUM_0023___y 196 GACGCCATTGATATGACAGATGAAGA-TTTGCTATGGATCAAAGAATTAT 244
BSNT_00073___ 245 CTGCTCATGAGAAAGTGGTAGCGATAGGGGAAATGGGACTGGATTATCAT 294
||...|||||.|||||.||.|||||.||.||||||||.||.|||||..||
BPUM_0023___y 245 CTCAACATGAAAAAGTCGTTGCGATCGGAGAAATGGGTCTCGATTACTAT 294
BSNT_00073___ 295 TGGGATAAATCACCTAAAGATATTCAAAAAGAGGTGTTTAGAAAACAAAT 344
|||||.||.||.||.||||||.|.||||||||.||.||||||...|||||
BPUM_0023___y 295 TGGGACAAGTCGCCAAAAGATGTGCAAAAAGAAGTCTTTAGACGCCAAAT 344
BSNT_00073___ 345 CGC-CTTAGCGAAAGAGGTCAATTTGCCTATTATCATTCATAACCGTGAT 393
.|| ||| |||||.||.||.|||.|.||.||..|.||||||||.|||||.
BPUM_0023___y 345 TGCTCTT-GCGAAGGAAGTGAATCTTCCGATCGTTATTCATAATCGTGAC 393
BSNT_00073___ 394 GCAACGGAGGATGTCGTGACCATTTTAAAAGAGGAAGGCGCAGAAGCTGT 443
||||||||.|||||.|||||.||.||||||||.||.||.||.|..|..||
BPUM_0023___y 394 GCAACGGAAGATGTTGTGACGATCTTAAAAGAAGAGGGAGCGGCTGAAGT 443
BSNT_00073___ 444 GGGCGGAATCATGCACTGCTTTACAGGAAGTGCGGAAGTGGCAAGAGAAT 493
.||.||.||.|||||.||||||||.||.||....|||.|.||||.||..|
BPUM_0023___y 444 TGGAGGGATTATGCATTGCTTTACTGGTAGCCTAGAAATCGCAAAAGTGT 493
BSNT_00073___ 494 GCATGAAAATGAATTTTTATTTGTCATTTGGAGGACCGGTGACATTTAAA 543
|.|||.|.|||||.||||||.|.|||||.||.|||||.||||||||||||
BPUM_0023___y 494 GTATGGATATGAACTTTTATATTTCATTCGGTGGACCTGTGACATTTAAA 543
BSNT_00073___ 544 AATGCGAAGAAACCGAAGGAAGTAGTGAAGGAAATTCCCAATGACCGGCT 593
|||||.||.||||||||.|||||.||.|||||.||.||.|.|||||||||
BPUM_0023___y 544 AATGCCAAAAAACCGAAAGAAGTGGTCAAGGACATACCAAGTGACCGGCT 593
BSNT_00073___ 594 GCTGATTGAAACGGACTGCCCGTTTCTCAC--ACCGC--AC-CCTTTCCG 638
..||||||||||.||||||||.| || |.||| || ||.||..|
BPUM_0023___y 594 TTTGATTGAAACAGACTGCCCAT-----ACTTAACGCCAACGCCATTTAG 638
BSNT_00073___ 639 CGGGAAAAGAAATGAGCCAAGCTATGTGAAATATGTGGCAGAACAAATCG 688
.||.|||.|.||||||||.||.||||||||||||.|.||||||||.||||
BPUM_0023___y 639 AGGAAAACGTAATGAGCCGAGTTATGTGAAATATATTGCAGAACAGATCG 688
BSNT_00073___ 689 CCGAATTAAAAGAAATGACCTTTGAAGAGATTGCGTCAA-TCACGACTGA 737
|.||.|||..||||||.|.||||||||||.|||| |.|| |.||.||..|
BPUM_0023___y 689 CGGAGTTACGAGAAATAAGCTTTGAAGAGCTTGC-TGAATTGACCACAAA 737
BSNT_00073___ 738 AAATGCGAAAAGACTTTTCCGTATAAACTGA 768
||||||.||||.|.|||||.|||||||||||
BPUM_0023___y 738 AAATGCAAAAAAAGTTTTCGGTATAAACTGA 768
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