Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00068 and BPUM_0018

See DNA alignment / Visit BSNT_00068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:59
# Commandline: needle
#    -asequence pep-align/BSNT_00068___yabB.1.24716.seq
#    -bsequence pep-align/BPUM_0018___yabB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00068___yabB-BPUM_0018___yabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00068___yabB-BPUM_0018___yabB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00068___yabB
# 2: BPUM_0018___yabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     195/247 (78.9%)
# Similarity:   219/247 (88.7%)
# Gaps:           0/247 ( 0.0%)
# Score: 1015.0
# 
#
#=======================================

BSNT_00068___      1 MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIV     50
                     ||||.:|||||||||||||||||.||||||||||||:||||||||||:|:
BPUM_0018___y      1 MVSLREDERLDYLLAEDMKIIQSKTVFAFSLDAVLLAKFAYVPIQKGEII     50

BSNT_00068___     51 DLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQII    100
                     |||||||||||||||||||.|.|||||:||.|||.|||.||:|:.||::|
BPUM_0018___y     51 DLCTGNGIVPLLLSTRSKASITGVEIQDRLFDMAKRSVAYNQLEKQIELI    100

BSNT_00068___    101 HDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCT    150
                     |.||.:||.:.|:::.||:||||||||||.:.|.|.||:|.|||||||||
BPUM_0018___y    101 HGDLNDMPARYGNHKVDVITCNPPYFKTPSKEEINENEYLAIARHEIHCT    150

BSNT_00068___    151 LEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPK    200
                     |||||.|||.|||||||.|:||||||||||.||||.|:|||||:||||||
BPUM_0018___y    151 LEDVIRVSSTLLKQGGKLAMVHRPGRLLEIVELMKKYRIEPKRIQFVYPK    200

BSNT_00068___    201 QGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK    247
                     ||||||||||||||.|:||||||||||||.:..|||:||||||||:.
BPUM_0018___y    201 QGKEANTILVEGIKDGKPDLKILPPLFVYGDDQEYTEEIRTILYGEA    247


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