Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00066 and BPUM_0017

See DNA alignment / Visit BSNT_00066 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:59
# Commandline: needle
#    -asequence pep-align/BSNT_00066___yabA.1.24716.seq
#    -bsequence pep-align/BPUM_0017___yabA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00066___yabA-BPUM_0017___yabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00066___yabA-BPUM_0017___yabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: BPUM_0017___yabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      92/121 (76.0%)
# Similarity:   104/121 (86.0%)
# Gaps:           6/121 ( 5.0%)
# Score: 469.5
# 
#
#=======================================

BSNT_00066___      1 MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRK     50
                     ||||||||||||||||||||||||||||.||||:|||||.||:||:|||:
BPUM_0017___y      1 MDKKELFDTVINLEEQIGSLYRQLGDLKNHIGEVIEENHQLQMENQHLRE     50

BSNT_00066___     51 RLDDTTQQIEKFKADKKES-KTQKTEQTDIGEGYDNLARLYQEGFHICNV     99
                     |||    |.::.|:.:.|: ..||...:|||||:||||||||||||||||
BPUM_0017___y     51 RLD----QSDRDKSSETENDSAQKPGHSDIGEGHDNLARLYQEGFHICNV     96

BSNT_00066___    100 HYGSVRKE-DCLFCLSFLNKK    119
                     ||||:||| ||||||||||||
BPUM_0017___y     97 HYGSIRKEGDCLFCLSFLNKK    117


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