Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00066 and BPUM_0017
See
Amino acid alignment /
Visit
BSNT_00066 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:59
# Commandline: needle
# -asequence dna-align/BSNT_00066___yabA.1.24716.seq
# -bsequence dna-align/BPUM_0017___yabA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00066___yabA-BPUM_0017___yabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00066___yabA-BPUM_0017___yabA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: BPUM_0017___yabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 265/371 (71.4%)
# Similarity: 265/371 (71.4%)
# Gaps: 28/371 ( 7.5%)
# Score: 923.5
#
#
#=======================================
BSNT_00066___ 1 TTGGATAAAAAAGAGTTATTTGATACAGTCATTAACTTAGAAGAACAAAT 50
|||||||||||.||..||||||||||.||.||.||.||||||||||||||
BPUM_0017___y 1 TTGGATAAAAAGGAACTATTTGATACGGTAATCAATTTAGAAGAACAAAT 50
BSNT_00066___ 51 TGGCTCACTGTACCGGCAGCTGGGGGATTTGAAGCAGCATATCGGTGAGA 100
.||.||.||.||.||.|||.|.||.||||||||..|.|||||||||||..
BPUM_0017___y 51 CGGTTCTCTTTATCGCCAGTTAGGTGATTTGAAAAATCATATCGGTGAAG 100
BSNT_00066___ 101 TGATTGAGGAAAATCATCATTTACAGCTTGAAAACAAGCATTTGCGCAAA 150
|||||||.|||||||||||..|.|||.|.||.||..||||.|||||..||
BPUM_0017___y 101 TGATTGAAGAAAATCATCAGCTGCAGATGGAGAATCAGCACTTGCGTGAA 150
BSNT_00066___ 151 CGGCTGGACGATACGACGCAG-CAGATTGAAAAGTTCAAA---GCTGATA 196
||.||||| .||| |.|||.| |..|||| .||||.|
BPUM_0017___y 151 CGTCTGGA---------TCAGTCCGATCG----GGACAAATCGTCTGAGA 187
BSNT_00066___ 197 ---AAAAAGAATCAAAAACACAGAAGACGGAGCAAACTGATATAGGGGAA 243
|.||.||.|| ..|.||||||.|.|..||..||||||||||.|||
BPUM_0017___y 188 CAGAGAATGATTC---TGCTCAGAAGCCAGGTCATTCTGATATAGGAGAA 234
BSNT_00066___ 244 GGATATGATAATCTGGCACGTCTGTATCAAGAAGGATTTCATATCTGCAA 293
||..|||||||.||.||.||..|.|||||.||.||.||.|||||.|||||
BPUM_0017___y 235 GGTCATGATAACCTAGCTCGGTTATATCAGGAGGGCTTCCATATTTGCAA 284
BSNT_00066___ 294 TGTCCACTATGGAAGTGTTCGAAAAGAG---GATTGTCTTTTCTGTCTGT 340
|||.||.|||||.||..|.||.|||||| ||.|||.|.||||||||||
BPUM_0017___y 285 TGTACATTATGGGAGCATACGTAAAGAGGGAGACTGTTTGTTCTGTCTGT 334
BSNT_00066___ 341 CATTCTTAAATAAAAAATAG- 360
||||.||||||||||||| |
BPUM_0017___y 335 CATTTTTAAATAAAAAAT-GA 354
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.