Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00061 and BPUM_0013

See DNA alignment / Visit BSNT_00061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:59
# Commandline: needle
#    -asequence pep-align/BSNT_00061___yaaQ.1.24716.seq
#    -bsequence pep-align/BPUM_0013___yaaQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00061___yaaQ-BPUM_0013___yaaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00061___yaaQ-BPUM_0013___yaaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00061___yaaQ
# 2: BPUM_0013___yaaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      91/109 (83.5%)
# Similarity:   103/109 (94.5%)
# Gaps:           0/109 ( 0.0%)
# Score: 476.0
# 
#
#=======================================

BSNT_00061___      1 MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVED     50
                     |||||||||||||::|||.||:|.|.|||||:||||||||||||:||.:|
BPUM_0013___y      1 MKLIVAVVQDQDSSKLLKILTEHQFGVTKLASTGGFLKSGNTTFIIGCDD     50

BSNT_00061___     51 IRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFV    100
                     :||:|||.|||||.:||||||||||||||||||||||||||||||||||:
BPUM_0013___y     51 VRVDKALQLIKENCRKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFI    100

BSNT_00061___    101 LPVDEFHQF    109
                     |||::||||
BPUM_0013___y    101 LPVEQFHQF    109


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