Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00061 and BPUM_0013
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:59
# Commandline: needle
# -asequence dna-align/BSNT_00061___yaaQ.1.24716.seq
# -bsequence dna-align/BPUM_0013___yaaQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00061___yaaQ-BPUM_0013___yaaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00061___yaaQ-BPUM_0013___yaaQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00061___yaaQ
# 2: BPUM_0013___yaaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 255/339 (75.2%)
# Similarity: 255/339 (75.2%)
# Gaps: 18/339 ( 5.3%)
# Score: 888.0
#
#
#=======================================
BSNT_00061___ 1 ATGAAATTGATAGTGGCAGTTGTACAAGATCAGGACAGCAACAGACTT-T 49
||||||||.||.||.||.||||||||.||.||.||.||.|.|| |.|| |
BPUM_0013___y 1 ATGAAATTAATTGTTGCCGTTGTACAGGACCAAGATAGTAGCA-AGTTGT 49
BSNT_00061___ 50 TGAAAACCTTAACGGATCA-CAACTTCAGAGTCACAA----AGCTTGCGA 94
||||||..||.||.||.|| ||| |||.|.||.|||| |||||
BPUM_0013___y 50 TGAAAATATTGACTGAACATCAA-TTCGGCGTGACAAAATTAGCTT---- 94
BSNT_00061___ 95 CGACAGGAGGATTTCTTAAA-TCAGGCAATACAACGTTTATGATCGG-TG 142
|.||.||.||.||| ||||| ||.||.|||||.||.|||||.||.|| ||
BPUM_0013___y 95 CAACTGGTGGGTTT-TTAAAGTCTGGGAATACGACTTTTATCATTGGTTG 143
BSNT_00061___ 143 TCGAGGATATACGCGTCAATAAAGCGTTG-AGTCTCATTAAAGAAAACGG 191
| ||.|||.|.||.||..||||||||||| || ||.||.||||||||..|
BPUM_0013___y 144 T-GATGATGTCCGAGTGGATAAAGCGTTGCAG-CTTATAAAAGAAAATTG 191
BSNT_00061___ 192 GCAGAAACGTGATCAGATGATTGCCCCTGTATCTCCAATGGGCGGAAATG 241
.|..|||||||||||.||||||||.|||||||||||||||||.||.||.|
BPUM_0013___y 192 CCGCAAACGTGATCAAATGATTGCACCTGTATCTCCAATGGGTGGTAACG 241
BSNT_00061___ 242 CTGATTCCTATGTCCCTTATCCAGTCGAAGTTGAAGTTGGCGGAGCGACA 291
|.|||||.|||||.||.||.||.||.||.|||||||||||.|||||.||.
BPUM_0013___y 242 CAGATTCATATGTACCATACCCTGTTGAGGTTGAAGTTGGTGGAGCTACT 291
BSNT_00061___ 292 GTATTTGTCCTTCCAGTCGATGAATTTCATCAATTTTAA 330
||.|||.|.||.|||||.||..|||||||||||||.|||
BPUM_0013___y 292 GTCTTTATTCTGCCAGTTGAACAATTTCATCAATTCTAA 330
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