Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00058 and BPUM_0010
See
DNA alignment /
Visit
BSNT_00058 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:59
# Commandline: needle
# -asequence pep-align/BSNT_00058___yaaN.1.24716.seq
# -bsequence pep-align/BPUM_0010___yaaN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00058___yaaN-BPUM_0010___yaaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00058___yaaN-BPUM_0010___yaaN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: BPUM_0010___yaaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity: 111/386 (28.8%)
# Similarity: 183/386 (47.4%)
# Gaps: 98/386 (25.4%)
# Score: 517.5
#
#
#=======================================
BSNT_00058___ 1 MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEENKEK 50
BPUM_0010___y 0 -------------------------------------------------- 0
BSNT_00058___ 51 AIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEIL 100
|:.:|:|||:.:||::|
BPUM_0010___y 1 ---------------------------------MMKYVEKKDIDQIGDVL 17
BSNT_00058___ 101 GELMKKLEQVNPDDLQSKKKGILARMFGRVSSSLQEVLSKYQKTSVQIDR 150
...:::|..|.|:||..||:|...:.|.|...|.||.:|:::....||:|
BPUM_0010___y 18 EAFLQQLHVVEPEDLVPKKQGFFLKWFQRDKRSTQETISRFRHAKSQIER 67
BSNT_00058___ 151 ISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTK 200
:|.:|::::..||||:.|||:|:|:|:.||..:.:.:||.|.|:..|:.:
BPUM_0010___y 68 LSARLQYARGVLISDHMLLERLFEENQTYFQEMTLQVAAVEEKITMLEQQ 117
BSNT_00058___ 201 TIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQVTIQSA 250
.:.|.:...|.:...|:..|||| :.::.:||.:|.:|||||||:.:|..
BPUM_0010___y 118 PLSETQISVERTLEEQLMSQEVN-VEEYMERLKERKYDLLLSRQIALQCN 166
BSNT_00058___ 251 PQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLLRQRNAVDAQQK 300
.|||:||:||..||..|||::..:||||.||::||||.::||.....:.:
BPUM_0010___y 167 AQIRMIQHTNHTLANHIQSTVSASIPLWINQMSIALTHIQQRANSALESR 216
BSNT_00058___ 301 VSDTTNELLLKNAELLKTNTIETARANERGLVDIDTLKKVQESLISTLEE 350
:..|...:..:..::|: |..|..:||||:||..|..||:|
BPUM_0010___y 217 IQKTYENVSKQQGQILE----------EASLSPVDTLKQVQRQLAETLQE 256
BSNT_00058___ 351 TLTIQEEGRIKRRQAEEELMMMEGDLKQKLLTIKER 386
||.::|.|..:|.|.:..:...|..|.. .|||
BPUM_0010___y 257 TLQVKEHGSQERAQLKNSMYEAEQQLAN---PIKE- 288
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.