Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00058 and BPUM_0010

See DNA alignment / Visit BSNT_00058 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:59
# Commandline: needle
#    -asequence pep-align/BSNT_00058___yaaN.1.24716.seq
#    -bsequence pep-align/BPUM_0010___yaaN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00058___yaaN-BPUM_0010___yaaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00058___yaaN-BPUM_0010___yaaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: BPUM_0010___yaaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity:     111/386 (28.8%)
# Similarity:   183/386 (47.4%)
# Gaps:          98/386 (25.4%)
# Score: 517.5
# 
#
#=======================================

BSNT_00058___      1 MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEENKEK     50
                                                                       
BPUM_0010___y      0 --------------------------------------------------      0

BSNT_00058___     51 AIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEIL    100
                                                      |:.:|:|||:.:||::|
BPUM_0010___y      1 ---------------------------------MMKYVEKKDIDQIGDVL     17

BSNT_00058___    101 GELMKKLEQVNPDDLQSKKKGILARMFGRVSSSLQEVLSKYQKTSVQIDR    150
                     ...:::|..|.|:||..||:|...:.|.|...|.||.:|:::....||:|
BPUM_0010___y     18 EAFLQQLHVVEPEDLVPKKQGFFLKWFQRDKRSTQETISRFRHAKSQIER     67

BSNT_00058___    151 ISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTK    200
                     :|.:|::::..||||:.|||:|:|:|:.||..:.:.:||.|.|:..|:.:
BPUM_0010___y     68 LSARLQYARGVLISDHMLLERLFEENQTYFQEMTLQVAAVEEKITMLEQQ    117

BSNT_00058___    201 TIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQVTIQSA    250
                     .:.|.:...|.:...|:..|||| :.::.:||.:|.:|||||||:.:|..
BPUM_0010___y    118 PLSETQISVERTLEEQLMSQEVN-VEEYMERLKERKYDLLLSRQIALQCN    166

BSNT_00058___    251 PQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLLRQRNAVDAQQK    300
                     .|||:||:||..||..|||::..:||||.||::||||.::||.....:.:
BPUM_0010___y    167 AQIRMIQHTNHTLANHIQSTVSASIPLWINQMSIALTHIQQRANSALESR    216

BSNT_00058___    301 VSDTTNELLLKNAELLKTNTIETARANERGLVDIDTLKKVQESLISTLEE    350
                     :..|...:..:..::|:          |..|..:||||:||..|..||:|
BPUM_0010___y    217 IQKTYENVSKQQGQILE----------EASLSPVDTLKQVQRQLAETLQE    256

BSNT_00058___    351 TLTIQEEGRIKRRQAEEELMMMEGDLKQKLLTIKER    386
                     ||.::|.|..:|.|.:..:...|..|..   .||| 
BPUM_0010___y    257 TLQVKEHGSQERAQLKNSMYEAEQQLAN---PIKE-    288


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