Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00056 and BPUM_0008

See DNA alignment / Visit BSNT_00056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:59
# Commandline: needle
#    -asequence pep-align/BSNT_00056___csfB.1.24716.seq
#    -bsequence pep-align/BPUM_0008___csfB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00056___csfB-BPUM_0008___csfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00056___csfB-BPUM_0008___csfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00056___csfB
# 2: BPUM_0008___csfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      38/64 (59.4%)
# Similarity:    53/64 (82.8%)
# Gaps:           1/64 ( 1.6%)
# Score: 217.0
# 
#
#=======================================

BSNT_00056___      1 MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYAFY     50
                     ||:..: ...|:||:::|.:||:||.:|:|.|||||:||||||||.|:.|
BPUM_0008___c      1 MDKKER-EAICLICEEKKTKGIYLYHQFLCRDCERKLISTSTSDPSYSDY     49

BSNT_00056___     51 VKKLKSIHTPPLYS     64
                     |:|||::|||||||
BPUM_0008___c     50 VRKLKNLHTPPLYS     63


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