Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00005 and BPUM_0005

See DNA alignment / Visit BSNT_00005 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:56
# Commandline: needle
#    -asequence pep-align/BSNT_00005.1.24716.seq
#    -bsequence pep-align/BPUM_0005___yaaB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00005-BPUM_0005___yaaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00005-BPUM_0005___yaaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00005
# 2: BPUM_0005___yaaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 84
# Identity:      51/84 (60.7%)
# Similarity:    65/84 (77.4%)
# Gaps:           3/84 ( 3.6%)
# Score: 264.0
# 
#
#=======================================

BSNT_00005         1 ---MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNG     47
                        :|||||||.|||||:||.|.|:|...|.:|||||:||:.:::....|
BPUM_0005___y      1 MWVLYIHLGDDCVVSTREIVAIVDYKMRSSSVVEEFLQKQEGQIISLSQG     50

BSNT_00005        48 TPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS     81
                     ||||||||.:::||||||||||||||.|:.||:.
BPUM_0005___y     51 TPKSIVVTTKSVYYSPLSSSTLKKRASFVIEIEV     84


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