Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00004 and BPUM_0004
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:56
# Commandline: needle
# -asequence pep-align/BSNT_00004___recF.1.24716.seq
# -bsequence pep-align/BPUM_0004___recF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00004___recF-BPUM_0004___recF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00004___recF-BPUM_0004___recF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00004___recF
# 2: BPUM_0004___recF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity: 310/370 (83.8%)
# Similarity: 347/370 (93.8%)
# Gaps: 0/370 ( 0.0%)
# Score: 1612.0
#
#
#=======================================
BSNT_00004___ 1 MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK 50
||||:|.|:|||||:|.||||:|||||:||||||||||||||||||||||
BPUM_0004___r 1 MYIQSLALTSYRNYEHTELQFDNKVNVMIGENAQGKTNLMEAIYVLSMAK 50
BSNT_00004___ 51 SHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIE 100
||||||||||||||:|||||||||:|:||.:|||||||||||||||||||
BPUM_0004___r 51 SHRTSNDKELIRWDQDYAKIEGRVIKKNGPLPMQLVISKKGKKGKVNHIE 100
BSNT_00004___ 101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL 150
|||||.|||||||||||||||:|||||||:|||||||||||||.||||||
BPUM_0004___r 101 QQKLSHYVGALNTIMFAPEDLSLVKGSPQIRRRFLDMEIGQVSAVYLHDL 150
BSNT_00004___ 151 SLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFT 200
||||||||||||:|||||||||||:.||:|||:|||:.|||||.:||.||
BPUM_0004___r 151 SLYQKILSQRNHYLKQLQTRKQTDQAMLEVLTEQLIDAAAKVVKRRLTFT 200
BSNT_00004___ 201 AQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSK 250
.||||||||:|.||||.||.|||:||||::||:..|||||.:||:|:|.|
BPUM_0004___r 201 KQLEKWAQPLHFGISRELETLTLQYHTAIEVSEASDLSKIKNSYEESFQK 250
BSNT_00004___ 251 LREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI 300
||::||:|||||.||||||:||:|||||||||||||||||||||||||||
BPUM_0004___r 251 LRDREIDRGVTLWGPHRDDLLFFVNGRDVQTYGSQGQQRTTALSLKLAEI 300
BSNT_00004___ 301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI 350
|||||||||||||||||||||||||||||||||||||||||||||||:||
BPUM_0004___r 301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVEGI 350
BSNT_00004___ 351 DHETLRQAGMFRVQNGALVK 370
||.||::|.:|||.:|.::.
BPUM_0004___r 351 DHATLKEAEIFRVASGKVID 370
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.