Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00003 and BPUM_0003

See DNA alignment / Visit BSNT_00003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:56
# Commandline: needle
#    -asequence pep-align/BSNT_00003___yaaA.1.24716.seq
#    -bsequence pep-align/BPUM_0003___yaaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00003___yaaA-BPUM_0003___yaaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00003___yaaA-BPUM_0003___yaaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00003___yaaA
# 2: BPUM_0003___yaaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 79
# Identity:      60/79 (75.9%)
# Similarity:    66/79 (83.5%)
# Gaps:           8/79 (10.1%)
# Score: 319.0
# 
#
#=======================================

BSNT_00003___      1 --------MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVN     42
                             |.|||:|:.||||||||||||:|||||||||||||||||.:|
BPUM_0003___y      1 MILKEVDIMPNPITIEKEMITLGQFLKLAEVIQSGGMAKWFLSEHEVFIN     50

BSNT_00003___     43 DEPDNRRGRKLYVGDVVEIEGFGSFQVVN     71
                     .|||||||||||.||||||||:|:|||||
BPUM_0003___y     51 QEPDNRRGRKLYPGDVVEIEGYGTFQVVN     79


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