Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00002 and BPUM_0002
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:56
# Commandline: needle
# -asequence pep-align/BSNT_00002___dnaN.1.24716.seq
# -bsequence pep-align/BPUM_0002___dnaN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00002___dnaN-BPUM_0002___dnaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00002___dnaN-BPUM_0002___dnaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00002___dnaN
# 2: BPUM_0002___dnaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 327/421 (77.7%)
# Similarity: 356/421 (84.6%)
# Gaps: 43/421 (10.2%)
# Score: 1662.0
#
#
#=======================================
BSNT_00002___ 1 -------------------------------------------MKFTIQK 7
|||||||
BPUM_0002___d 1 MWIGCLSFLFTDLSTYSQALLLLLRFLLIKYIYMSLRKFRRTTMKFTIQK 50
BSNT_00002___ 8 DRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFI 57
||||||||||||||||||||||||||||||||:|||.|||||||||||||
BPUM_0002___d 51 DRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSLTGSDSDISIESFI 100
BSNT_00002___ 58 PKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIR 107
|:.:||.|::||::|||||||||||||||||||||||||||:..:|||||
BPUM_0002___d 101 PQRDGDLEVITIDRPGSIVLQARFFSEIVKKLPMATVEIEVEQNHLTIIR 150
BSNT_00002___ 108 SGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSTSE 157
||.||||||||||:|||||||||||||.||||||||||||||||||||||
BPUM_0002___d 151 SGSAEFNLNGLDAEEYPHLPQIEEHHAFQIPTDLLKNLIRQTVFAVSTSE 200
BSNT_00002___ 158 TRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKS 207
|||||||||||||:.||:||||||||||||||||||.|:.||||||||||
BPUM_0002___d 201 TRPILTGVNWKVEKGELICTATDSHRLALRKAKLDIDEESSYNVVIPGKS 250
BSNT_00002___ 208 LTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIP 257
|||||:||||.|:||.||||||||||||:||||||||||||||||..|||
BPUM_0002___d 251 LTELSRILDDGQDLVSIVITETQVLFKAQNVLFFSRLLDGNYPDTARLIP 300
BSNT_00002___ 258 QDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESIEISSNSP 307
|:|||:::|||||||||||||||||||||||||||||.|.:|:|||||||
BPUM_0002___d 301 QESKTDVVVNTKEFLQAIDRASLLAREGRNNVVKLSADPEQSLEISSNSP 350
BSNT_00002___ 308 EIGKVVEAIAADQIEGEELNISFSPKYMLDALKVLEGAEIRVSFTGAMRP 357
|||||||.:.||.|:||:|.|||||||||||||||||.||.|||||||||
BPUM_0002___d 351 EIGKVVETVQADDIKGEDLKISFSPKYMLDALKVLEGTEIHVSFTGAMRP 400
BSNT_00002___ 358 FLIRTPNDETIVQLILPVRTY 378
||:|||||::|:|||||||||
BPUM_0002___d 401 FLLRTPNDDSILQLILPVRTY 421
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