Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06218 and BL07078

See DNA alignment / Visit BSNT_06218 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence pep-align/BSNT_06218___yycC.1.5803.seq
#    -bsequence pep-align/BL07078___yycC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06218___yycC-BL07078___yycC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06218___yycC-BL07078___yycC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06218___yycC
# 2: BL07078___yycC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 46
# Identity:      37/46 (80.4%)
# Similarity:    45/46 (97.8%)
# Gaps:           1/46 ( 2.2%)
# Score: 195.0
# 
#
#=======================================

BSNT_06218___      1 MRPLQISAETAQKLAESLNLPLEQIMHMPQHILLAKMAELQKEDKS     46
                     |:||||||||||||:|:||||||||||:||||||||:||:||:|: 
BL07078___yyc      1 MKPLQISAETAQKLSETLNLPLEQIMHLPQHILLAKIAEIQKKDQ-     45


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