Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06218 and BL07078

See Amino acid alignment / Visit BSNT_06218 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence dna-align/BSNT_06218___yycC.1.5803.seq
#    -bsequence dna-align/BL07078___yycC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06218___yycC-BL07078___yycC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06218___yycC-BL07078___yycC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06218___yycC
# 2: BL07078___yycC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     111/142 (78.2%)
# Similarity:   111/142 (78.2%)
# Gaps:           5/142 ( 3.5%)
# Score: 429.5
# 
#
#=======================================

BSNT_06218___      1 GTGAGACCTTTGCAAATTTCTGCTGAAACTGCACAAAAGCTTGCAGAGTC     50
                     .|||.||||||.|||||||||||.|||||.||.|||||.|||.|.||..|
BL07078___yyc      1 ATGAAACCTTTACAAATTTCTGCCGAAACGGCGCAAAAACTTTCGGAAAC     50

BSNT_06218___     51 CTTGAATCTGCCGCTTGAACAGATCATGCATATGCCTCAGCATATTCTGC    100
                     |||.|||||.||.||||||||.|||||||||.||||.||||||||.||||
BL07078___yyc     51 CTTAAATCTTCCTCTTGAACAAATCATGCATTTGCCGCAGCATATCCTGC    100

BSNT_06218___    101 TTGCCAAAATGGCTGAACTGCAAAAAGAGGACAAATC-ATAG    141
                     ||||.|||||.||.|||.|.|    |||.||.|.||| ||||
BL07078___yyc    101 TTGCGAAAATTGCCGAAATTC----AGAAGAAAGATCAATAG    138


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