Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03278 and BL07039

See DNA alignment / Visit BSNT_03278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence pep-align/BSNT_03278___sspL.1.5803.seq
#    -bsequence pep-align/BL07039___sspL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03278___sspL-BL07039___sspL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03278___sspL-BL07039___sspL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03278___sspL
# 2: BL07039___sspL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 48
# Identity:      30/48 (62.5%)
# Similarity:    34/48 (70.8%)
# Gaps:           6/48 (12.5%)
# Score: 140.0
# 
#
#=======================================

BSNT_03278___      1 MKKK---DKGRLTGGVTPQGDL---EGKTHNDPKTELEERAKKSNTKR     42
                     |:|:   .:||||||||||||:   ....|.|||||||.||||||||.
BL07039___ssp      1 MEKQHSAGRGRLTGGVTPQGDIVLNRDNRHTDPKTELENRAKKSNTKH     48


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