Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03278 and BL07039

See Amino acid alignment / Visit BSNT_03278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_03278___sspL.1.5803.seq
#    -bsequence dna-align/BL07039___sspL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03278___sspL-BL07039___sspL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03278___sspL-BL07039___sspL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03278___sspL
# 2: BL07039___sspL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      97/148 (65.5%)
# Similarity:    97/148 (65.5%)
# Gaps:          20/148 (13.5%)
# Score: 313.5
# 
#
#=======================================

BSNT_03278___      1 -ATGAAAA---------AGAAAGATAAAGGCCGGCTGACCGGCGGTGTTA     40
                      ..|||||         ||.|.|| |.||||||.|||||.||||||||.|
BL07039___ssp      1 GTGGAAAAACAGCATTCAGCAGGA-AGAGGCCGTCTGACAGGCGGTGTCA     49

BSNT_03278___     41 CTCCGCAAGGCGACCTGGAA-------GGCAAAAC--ACATAATGACCCT     81
                     |.||.||.||.||..|.|.|       ||.|.|||  .||||..|||||.
BL07039___ssp     50 CGCCCCAGGGTGATATTGTATTGAACCGGGATAACCGTCATACAGACCCA     99

BSNT_03278___     82 AAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTAG    129
                     |||||.||||||||..|..|.||.|||||||||||||||||||..|||
BL07039___ssp    100 AAAACCGAGCTTGAAAACCGGGCGAAAAAAAGCAATACAAAACATTAG    147


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