Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06219 and BL05396
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence pep-align/BSNT_06219___yycB.1.5803.seq
# -bsequence pep-align/BL05396___yycB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06219___yycB-BL05396___yycB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06219___yycB-BL05396___yycB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06219___yycB
# 2: BL05396___yycB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity: 261/406 (64.3%)
# Similarity: 322/406 (79.3%)
# Gaps: 9/406 ( 2.2%)
# Score: 1355.5
#
#
#=======================================
BSNT_06219___ 1 --MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAELHMSNG 48
.......::.:.:||.||||||||||||||:|||:|||||:::.::||
BL05396___yyc 1 MHYIDARRARLNNIFLIAGIIFIAFNLRPAITAVGPLISSIRSDMDLTNG 50
BSNT_06219___ 49 AAGFLTALPLLSFAVLSPLAPKLGQRLGNERTLWLGLVILLIGVLTRSTG 98
.|||||.|||||||||||:||||||:||||||||:||||||||:|.||.|
BL05396___yyc 51 MAGFLTTLPLLSFAVLSPVAPKLGQKLGNERTLWVGLVILLIGILLRSYG 100
BSNT_06219___ 99 YTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIVISLYTTSMNIFA 148
.:..||.|||||||||||.|||||||||||:|:|.||:.|.|||:|:|||
BL05396___yyc 101 ESITLFAGTALIGVGIAICNVLLPSLIKHKFPDKAGIMTSFYTTAMSIFA 150
BSNT_06219___ 149 ALASGVSVPLATQMDGGWKQAFLLWGGLALLALLIWIPQLRHRDTANQTM 198
|||||:|:||:..:..||..:.::|.|||.:|:|||:||||:.||.|:|:
BL05396___yyc 151 ALASGISIPLSHGLAWGWSASLMVWAGLAFVAILIWVPQLRYHDTGNRTV 200
BSNT_06219___ 199 KLQS--SSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHGIDTATA 246
.|:: .::|.||:||.||.|||:||||||.:|||.||||||||:..:.|
BL05396___yyc 201 SLKADGQTVWRSKIAWQVTFFMGIQSFLFYCTIAWLPEILRSHGMSMSLA 250
BSNT_06219___ 247 GWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCGLLAGG 296
|||:||||||||||||||||||.|.:.|:.||.||..:||.|:.|||.||
BL05396___yyc 251 GWMLSLMQFASLPSTFLTPVLAGRFQNQKSIVLALGILYLAGMSGLLYGG 300
BSNT_06219___ 297 SHTLLAIWMIIIGIGQGSSISLALTLIGLRSENAQQAAALSGMSQSFGYL 346
|..:|.:|:|:|||||||||||||||||||||||.|||||||||||.|||
BL05396___yyc 301 STAMLTLWVILIGIGQGSSISLALTLIGLRSENADQAAALSGMSQSAGYL 350
BSNT_06219___ 347 LAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQRAGRDRYIFQSE 396
|||:||.|||:|:|..|||..||:|.|.||:.:..||..|||::||:...
BL05396___yyc 351 LAAIGPSFVGFLYDHMHSWNGPILLFIGALVALIGAGLGAGRNQYIYAKA 400
BSNT_06219___ 397 KQRNSA 402
.
BL05396___yyc 401 A----- 401
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