Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05947 and BL05381

See DNA alignment / Visit BSNT_05947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05947___yxkD.1.5803.seq
#    -bsequence pep-align/BL05381___yxkD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05947___yxkD-BL05381___yxkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05947___yxkD-BL05381___yxkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05947___yxkD
# 2: BL05381___yxkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     236/278 (84.9%)
# Similarity:   264/278 (95.0%)
# Gaps:           0/278 ( 0.0%)
# Score: 1240.0
# 
#
#=======================================

BSNT_05947___      1 MKKRMLDVLMLVIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYLFQWS     50
                     |||:.:|:::::|||||||||||||||||||||||||||||||||:|:||
BL05381___yxk      1 MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWS     50

BSNT_05947___     51 PGVTNFILNAFLLLIGYKFLDGKTTVYTIIAVAANSLFLHLTHGWSIPSD    100
                     ||:|||:||..||:|||:|||.|||:||||||||||.|||:|..|::|:|
BL05381___yxk     51 PGITNFVLNGILLIIGYRFLDKKTTIYTIIAVAANSFFLHVTEDWTVPAD    100

BSNT_05947___    101 ELIINTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYLDWNISYALL    150
                     |:||:|||||||||||||||||||||||||||||||||||.|||||||||
BL05381___yxk    101 EVIISTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYFDWNISYALL    150

BSNT_05947___    151 FFDLIVVFSSYFIIGAEKMMFTIVMLYIGTKVMDFIIEGLNTKKAITVIS    200
                     ..||:|||||||||||||:|||||||||.||||||||||||||||||:||
BL05381___yxk    151 MIDLVVVFSSYFIIGAEKLMFTIVMLYIATKVMDFIIEGLNTKKAITIIS    200

BSNT_05947___    201 ENKSEIAEQVNTLMDRGVTILSGKGNYTGQSKEILYIVINKQELSMLKKI    250
                     |:|:|||.|||||||||||||||:|:|||.||||||||||||||||||||
BL05381___yxk    201 EHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVINKQELSMLKKI    250

BSNT_05947___    251 IRSCDKKAFVIVHDVRDVFGEGFVDISK    278
                     |||.|||||||:||||||||||||||||
BL05381___yxk    251 IRSTDKKAFVIIHDVRDVFGEGFVDISK    278


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