Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04908 and BL05331

See DNA alignment / Visit BSNT_04908 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence pep-align/BSNT_04908.1.5803.seq
#    -bsequence pep-align/BL05331___yusZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04908-BL05331___yusZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04908-BL05331___yusZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04908
# 2: BL05331___yusZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     120/280 (42.9%)
# Similarity:   171/280 (61.1%)
# Gaps:          50/280 (17.9%)
# Score: 669.0
# 
#
#=======================================

BSNT_04908         0 --------------------------------------------------      0
                                                                       
BL05331___yus      1 MNNKIAIVTGATSGFGLLTALKLASTHFVIATARHPEKAEALRNRIAELS     50

BSNT_04908         1 MSDSIHITALDVTDEQSIVSFGKAISAYAPIDLLVNNAGTAYGGFIEDVP     50
                     :..||.:..||||:||||.||.:.:..|..||:|:||||||||||.|::.
BL05331___yus     51 IESSIAVAELDVTNEQSISSFSEELKQYGQIDVLINNAGTAYGGFAEELS    100

BSNT_04908        51 MEHFREQFETNVFGVIHVTKTVLPYIRKHGGAKIINVSSISGLTGFPALS    100
                     :..:|:|::|||||::.|||.||||::||.||||||:|||||...|||.|
BL05331___yus    101 LGDYRKQYDTNVFGLVAVTKAVLPYMKKHSGAKIINLSSISGRIAFPAFS    150

BSNT_04908       101 PYVSSKHALEGFSESLRIELLPFGIETALIEPGSYKTSIWSTSLSNFMSV    150
                     .|.|||||:||||||||:||.||||..|:::||||:|:||.||.:..::.
BL05331___yus    151 AYASSKHAVEGFSESLRLELRPFGINVAVVQPGSYQTAIWETSFAAQVTA    200

BSNT_04908       151 PADDSAYHQYYKKILSYVQKTGEESGDPQEVADLIYQLATKQHIKKLRYP    200
                     |..:|.|..|:::|.:|:..:.:..|:|.:||:||.:||.|:.:.:||||
BL05331___yus    201 PDAESQYKTYFERISAYIAASRKHYGNPDDVAELICRLAAKKRLNRLRYP    250

BSNT_04908       201 IGKGIKLTLLFRSLFPWSAWESILKKKLFK    230
                     ||:|::|::|...:.||..||..:.|||.|
BL05331___yus    251 IGRGVRLSILLHQILPWRIWERAVIKKLLK    280


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.