Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04873 and BL05329

See DNA alignment / Visit BSNT_04873 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04873.1.5803.seq
#    -bsequence pep-align/BL05329.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04873-BL05329.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04873-BL05329.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04873
# 2: BL05329
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      57/85 (67.1%)
# Similarity:    62/85 (72.9%)
# Gaps:           7/85 ( 8.2%)
# Score: 289.0
# 
#
#=======================================

BSNT_04873         1 MDNQQQSQM--PPSVISTKDHLYLNDMLNWNLLAMKKAHFMAQQCQDQTL     48
                        .||..|  ||.||||||||||.|||||||||||||||||.|||||:|
BL05329            1 ---MQQQGMTTPPPVISTKDHLYLQDMLNWNLLAMKKAHFMADQCQDQSL     47

BSNT_04873        49 KQELDRIGHMHHDHYQRILKHLQPGQQQ--SGYIQ     81
                     |.||||:|.|||.||..||:.|:..|.|  |.|:|
BL05329           48 KTELDRVGQMHHHHYNMILEQLRQNQTQNPSAYMQ     82


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