Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04873 and BL05329
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04873.1.5803.seq
# -bsequence dna-align/BL05329.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04873-BL05329.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04873-BL05329.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04873
# 2: BL05329
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity: 181/267 (67.8%)
# Similarity: 181/267 (67.8%)
# Gaps: 39/267 (14.6%)
# Score: 602.5
#
#
#=======================================
BSNT_04873 1 ATGGATAATCAGCAGCAATCTCAAATG------CCGCCTTCCGTTATTTC 44
||| ||||||||| ..|||| |||||..|.||.|||||
BL05329 1 ATG------CAGCAGCAA---GGAATGACAACACCGCCGCCGGTCATTTC 41
BSNT_04873 45 GACAAAGGATCATTTGTATCTCAATGACATGCTGAACTGGAATTTGCTCG 94
.||.|||||.|||.|||||.|..|.||.||||||||||||||..||||||
BL05329 42 AACGAAGGACCATCTGTATTTGCAGGATATGCTGAACTGGAACCTGCTCG 91
BSNT_04873 95 CGATGAAAAAAGCGCATTTCATGGCGCAGCAGTGCCAGGATCAAAC-GTT 143
|||||||||||||||||||.||||||.|.||.|||||||||||..| .||
BL05329 92 CGATGAAAAAAGCGCATTTTATGGCGGATCAATGCCAGGATCAGTCTCTT 141
BSNT_04873 144 AAAGCAAGAACTCGACCGCATCGGACACATGCATCATGATCACTATCAA- 192
|||.| ||||||||||.|..||||.||.|||||.|||.|.||.|| |||
BL05329 142 AAAAC-AGAACTCGACAGGGTCGGCCAAATGCACCATCACCATTA-CAAT 189
BSNT_04873 193 AGAATATTAAAGCACCTGC------------AGCCAGGCCAG-CAGCAGT 229
|..|||||..||||.||.| .||.|..||.| |||||
BL05329 190 ATGATATTGGAGCAGCTTCGTCAAAATCAAACGCAAAACCCGTCAGCA-- 237
BSNT_04873 230 CCGGCTACATCCAATAA 246
|||||.|||||.
BL05329 238 -----TACATGCAATAG 249
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