Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04869 and BL05328

See DNA alignment / Visit BSNT_04869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04869.1.5803.seq
#    -bsequence pep-align/BL05328.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04869-BL05328.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04869-BL05328.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04869
# 2: BL05328
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 53
# Identity:      37/53 (69.8%)
# Similarity:    42/53 (79.2%)
# Gaps:           5/53 ( 9.4%)
# Score: 178.5
# 
#
#=======================================

BSNT_04869         1 MVREKKNPSSAAVSAASVKGDAGP--TQHYGGGKRTSQNQQYKKHNMEQS     48
                     ||||:||||||||||||:||:|||  .:...||||||||||||||||:..
BL05328            1 MVRERKNPSSAAVSAASIKGNAGPDYKKTDAGGKRTSQNQQYKKHNMDVP     50

BSNT_04869        48 ---     48
                        
BL05328           51 EDH     53


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