Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04869 and BL05328

See Amino acid alignment / Visit BSNT_04869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence dna-align/BSNT_04869.1.5803.seq
#    -bsequence dna-align/BL05328.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04869-BL05328.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04869-BL05328.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04869
# 2: BL05328
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     117/168 (69.6%)
# Similarity:   117/168 (69.6%)
# Gaps:          27/168 (16.1%)
# Score: 428.0
# 
#
#=======================================

BSNT_04869         1 ATGGTACGAGAGAAAAAAAATCCGTCTTCAGCGGCAGTCAGCGCGGCGAG     50
                     .|||||||.||.|.|||||||||.|||||.||.|||||||||||.||.||
BL05328            1 TTGGTACGTGAAAGAAAAAATCCATCTTCTGCCGCAGTCAGCGCCGCAAG     50

BSNT_04869        51 CGTAAAGGGAGATGCCGGTCCGACTCAGCATT--------ACGG----CG     88
                     |.||||.||..||||.|||||      |.|||        ||||    .|
BL05328           51 CATAAAAGGCAATGCAGGTCC------GGATTATAAAAAGACGGATGCGG     94

BSNT_04869        89 GCGGAAAACGGACAAGTCAAAATCAGCAGTATAAAAAACATAACATGGA-    137
                     ||||.|||||||||||.|||||.|||||.||||||||.|||||.||||| 
BL05328           95 GCGGTAAACGGACAAGCCAAAACCAGCAATATAAAAAGCATAATATGGAT    144

BSNT_04869       138 -------ACAATCA-TAA    147
                            |..|||| |||
BL05328          145 GTTCCTGAAGATCACTAA    162


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