Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04467 and BL05308
See
DNA alignment /
Visit
BSNT_04467 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_04467___ytiB.1.5803.seq
# -bsequence pep-align/BL05308___ytiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04467___ytiB-BL05308___ytiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04467___ytiB-BL05308___ytiB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04467___ytiB
# 2: BL05308___ytiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 145/189 (76.7%)
# Similarity: 170/189 (89.9%)
# Gaps: 2/189 ( 1.1%)
# Score: 789.0
#
#
#=======================================
BSNT_04467___ 1 MSLLNDILEFNKTFTEQREYEKYQTSKFPDKKMAILSCMDTRLVELLPHA 50
|.||::||:||:.|.|:::|:||||||||||:|.||||||||||||||||
BL05308___yti 1 MKLLDNILQFNQQFVERQDYQKYQTSKFPDKRMVILSCMDTRLVELLPHA 50
BSNT_04467___ 51 MNLRNGDVKIIKSAGALVTHPFGSIMRSLLVAVYELNADEVCVIGHHDCG 100
||:|||||||:|||||||.|||||||||:|||||||||||||||||:|||
BL05308___yti 51 MNMRNGDVKIVKSAGALVAHPFGSIMRSILVAVYELNADEVCVIGHYDCG 100
BSNT_04467___ 101 MSKISSKSMLEKIKARGIPEERIETIKYSGVDFDQWFKSFDSVEASVKDS 150
|||:|..|.|:|:..||||:|||||::||||||:||.|||||||.||:||
BL05308___yti 101 MSKLSCDSFLDKVVKRGIPKERIETLEYSGVDFEQWLKSFDSVEDSVRDS 150
BSNT_04467___ 151 VDVIKHHPLFPENVPVHGLVIDPKTGKLDLIVNGYNN-- 187
|.||::|||.||.||||||||||:||:||||||||..
BL05308___yti 151 VSVIRNHPLMPEEVPVHGLVIDPETGRLDLIVNGYPEER 189
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.