Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04467 and BL05308

See Amino acid alignment / Visit BSNT_04467 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence dna-align/BSNT_04467___ytiB.1.5803.seq
#    -bsequence dna-align/BL05308___ytiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04467___ytiB-BL05308___ytiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04467___ytiB-BL05308___ytiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04467___ytiB
# 2: BL05308___ytiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     421/579 (72.7%)
# Similarity:   421/579 (72.7%)
# Gaps:          24/579 ( 4.1%)
# Score: 1433.5
# 
#
#=======================================

BSNT_04467___      1 ATGAGTCTTCTAAATGATATTCTTGAATTTAA-CAAGACA-TTTACTGAA     48
                     ||||..|||.|..||.|||||||..|.||.|| ||  ||| |||..||||
BL05308___yti      1 ATGAAACTTTTGGATAATATTCTACAGTTCAATCA--ACAGTTTGTTGAA     48

BSNT_04467___     49 C-AAAGAGAGTATGAAAAGTATCAAACATCAAAATTTCCAGATAAAAAAA     97
                     | ..|| ||.|||.||||.|||||||||...||.|||||.|||||||.||
BL05308___yti     49 CGGCAG-GACTATCAAAAATATCAAACAAGCAAGTTTCCCGATAAAAGAA     97

BSNT_04467___     98 TGGCGATTCTTTCTTGCATGGACACTCGTCTGGTTGAACTGCTGCCGCAT    147
                     |||.||||||.||||||||||||||..|.||.||.||.|||||.||.|||
BL05308___yti     98 TGGTGATTCTGTCTTGCATGGACACAAGGCTTGTCGAGCTGCTTCCTCAT    147

BSNT_04467___    148 GCGATGAATTTGCGAAACGGTGATGTGAAAATCATTAAAAGTGCCGGTGC    197
                     ||.||||||.||||.|||||.||.|||||.|||.||||.||.||.||.||
BL05308___yti    148 GCCATGAATATGCGGAACGGAGACGTGAAGATCGTTAAGAGCGCGGGCGC    197

BSNT_04467___    198 GCTTGTGACACACCCATTCGGAAGCATCATGAGAAGTTTACTCGTCGCAG    247
                     .||.|||.|.||.||.||||||||.||.|||.|.||..|.|||||.||.|
BL05308___yti    198 ACTCGTGGCTCATCCTTTCGGAAGTATTATGCGGAGCATTCTCGTTGCGG    247

BSNT_04467___    248 TGTACGAGCTGAATGCAGATGAGGTGTGTGTGATCGGGCATCACGATTGC    297
                     |.|||||.|||||.||.|||||.||.||.||||||||.|||.|.||.|||
BL05308___yti    248 TATACGAACTGAACGCTGATGAAGTATGCGTGATCGGCCATTATGACTGC    297

BSNT_04467___    298 GGCATGAGCAAAATCAGCAGCAAAAGCATGCTTGAAAAAATC--AAAGCA    345
                     |||||||||||..|.|||.||.|.|||.|..|.||.|||.||  .|||| 
BL05308___yti    298 GGCATGAGCAAGCTGAGCTGCGACAGCTTTTTGGACAAAGTCGTCAAGC-    346

BSNT_04467___    346 AGAGGGATTCCGGAAGAACGCATCGAAACAATAAAGTACTCCGGTGTAGA    395
                      |.||.|||||..|||||||.||.|||||..|..||||||||||.||.||
BL05308___yti    347 -GCGGCATTCCAAAAGAACGGATTGAAACGCTTGAGTACTCCGGCGTCGA    395

BSNT_04467___    396 CTTTGATCAATGGTTTAAAAGCTTTGATTCAGTGGAAGCGAGTGTGAAAG    445
                     .|||||.||||||.|.||||||||||||||.||.||.|..||.||.|..|
BL05308___yti    396 TTTTGAACAATGGCTGAAAAGCTTTGATTCTGTAGAGGACAGCGTCAGGG    445

BSNT_04467___    446 ACAGCGTAGACGTTATT---AAACATCACCCGCTGTTCCCTGAAAACGTT    492
                     ||||.|||..|||||||   ||.|||   ||||||.|.||.||..|.||.
BL05308___yti    446 ACAGTGTAAGCGTTATTCGGAACCAT---CCGCTGATGCCGGAGGAAGTA    492

BSNT_04467___    493 CCGGTCCATGG-CTTAGTCATTGATCCTAAAACCGGAAAACTGGATCTTA    541
                     ||.||.||.|| ||| |||||||||||..||||.||.|.|||||||||.|
BL05308___yti    493 CCTGTTCACGGACTT-GTCATTGATCCGGAAACAGGCAGACTGGATCTCA    541

BSNT_04467___    542 TCGTAAACGGTTAT----AACA--ATTAA    564
                     |.||.|||||.|||    ||.|  ..|||
BL05308___yti    542 TTGTCAACGGATATCCGGAAGAGCGCTAA    570


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