Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04001 and BL05289

See DNA alignment / Visit BSNT_04001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_04001___yrzK.1.5803.seq
#    -bsequence pep-align/BL05289___yrzK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04001___yrzK-BL05289___yrzK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04001___yrzK-BL05289___yrzK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: BL05289___yrzK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      28/56 (50.0%)
# Similarity:    39/56 (69.6%)
# Gaps:           2/56 ( 3.6%)
# Score: 162.0
# 
#
#=======================================

BSNT_04001___      1 MKYHPKMGRAFHDGEANLHYSDHADPDTTGYLTETASEFGLMSKEAALRK     50
                     |:|:.:||||.|:.:||||..:||||:..|::.|||:|.||.|||:...|
BL05289___yrz      1 MRYNQRMGRAIHEQDANLHLKEHADPERAGFMEETATELGLTSKESIQNK     50

BSNT_04001___     51 NNRNKA     56
                     .||.  
BL05289___yrz     51 KNRK--     54


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