Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04001 and BL05289
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_04001___yrzK.1.5803.seq
# -bsequence dna-align/BL05289___yrzK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04001___yrzK-BL05289___yrzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04001___yrzK-BL05289___yrzK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: BL05289___yrzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 113/181 (62.4%)
# Similarity: 113/181 (62.4%)
# Gaps: 26/181 (14.4%)
# Score: 301.0
#
#
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BSNT_04001___ 1 ATGAAATATCATCCAAAAATGGGACGTGCATTTCACGACGGTGAAGCGAA 50
||||..|||.|||.||.||||||..|.||..|.||.||....||.|||||
BL05289___yrz 1 ATGAGGTATAATCAAAGAATGGGCAGGGCGATCCATGAGCAAGATGCGAA 50
BSNT_04001___ 51 TCTGCAT-TACAGCGATCACGCAGATCCCGATACGA-----CTGGTTATC 94
||||||| ||.|| ||.||.||.|| |||| || |.|| |
BL05289___yrz 51 TCTGCATCTAAAG-GAGCATGCGGA-CCCG----GAGCGCGCCGG----C 90
BSNT_04001___ 95 TT-ACG---GAAACAGCATCTGAATTTGGTCTTATGTCCAAAGAAGCAGC 140
|| |.| |||||.||..||||..|.||.||.|.||||||||||.||..
BL05289___yrz 91 TTCATGGAAGAAACGGCCACTGAGCTGGGGCTGACGTCCAAAGAATCAAT 140
BSNT_04001___ 141 GCTGAGGAAAAACAACCGGAATAAAGCTTGA 171
.|.||..|||||.|||||.|| |.||
BL05289___yrz 141 TCAGAATAAAAAGAACCGCAA-ATAG----- 165
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