Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03956 and BL05284

See DNA alignment / Visit BSNT_03956 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03956___yrhC.1.5803.seq
#    -bsequence pep-align/BL05284___yrhC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03956___yrhC-BL05284___yrhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03956___yrhC-BL05284___yrhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03956___yrhC
# 2: BL05284___yrhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      49/77 (63.6%)
# Similarity:    59/77 (76.6%)
# Gaps:           1/77 ( 1.3%)
# Score: 256.0
# 
#
#=======================================

BSNT_03956___      1 MHKNRMKSLKEDYKHFAFTLLAVSTFLYIGAVLPDQGLTLGQKSTMFLAD     50
                     |.|.::|||.||||.||||||:||.|||||:|:|.|||..|||.||.||.
BL05284___yrh      1 MQKKKVKSLMEDYKQFAFTLLSVSAFLYIGSVIPGQGLETGQKMTMMLAT     50

BSNT_03956___     51 CVFLAGAFFCADRSLIYKKRLEEADE-     76
                     |.||.|||:|..|||.||::|:|.:| 
BL05284___yrh     51 CGFLGGAFYCVKRSLKYKRQLDEMEES     77


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