Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03934 and BL05280

See DNA alignment / Visit BSNT_03934 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_03934___yrhK.1.5803.seq
#    -bsequence pep-align/BL05280___yrhK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03934___yrhK-BL05280___yrhK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03934___yrhK-BL05280___yrhK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03934___yrhK
# 2: BL05280___yrhK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 97
# Identity:      56/97 (57.7%)
# Similarity:    67/97 (69.1%)
# Gaps:          11/97 (11.3%)
# Score: 285.0
# 
#
#=======================================

BSNT_03934___      1 MVTVNEEHDFQKELKRYELFFKKRYKILYTVNDFIIGALFLVGSFFFFYD     50
                             ..|...||||||||||||:|:|:|||:||.|||||||.||.:
BL05280___yrh      1 --------MPQNNNKRYELFFKKRYKVLHTLNDFLIGLLFLVGSFCFFSE     42

BSNT_03934___     51 RLMSAGIWLFAIGSLLLLIRPTIRLIHDFHYRKHVEQQFKHQSSTDD     97
                     .|..||:|:|.|||..|||||||||:|||||||.||.:   :|...:
BL05280___yrh     43 ELKPAGLWMFVIGSFQLLIRPTIRLVHDFHYRKFVESR---RSKCRE     86


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