Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03785 and BL05272

See DNA alignment / Visit BSNT_03785 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03785___rpsU.1.5803.seq
#    -bsequence pep-align/BL05272___rpsU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03785___rpsU-BL05272___rpsU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03785___rpsU-BL05272___rpsU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03785___rpsU
# 2: BL05272___rpsU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      55/57 (96.5%)
# Similarity:    57/57 (100.0%)
# Gaps:           0/57 ( 0.0%)
# Score: 272.0
# 
#
#=======================================

BSNT_03785___      1 MSKTVVRKNESLEDALRRFKRSVSKTGTLQEARKREFYEKPSVKRKKKSE     50
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BL05272___rps      1 MSKTVVRKNESLEDALRRFKRSVSKTGTLQEARKREFYEKPSVRRKKKSE     50

BSNT_03785___     51 AARKRKF     57
                     ||||||:
BL05272___rps     51 AARKRKY     57


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