Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03785 and BL05272

See Amino acid alignment / Visit BSNT_03785 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence dna-align/BSNT_03785___rpsU.1.5803.seq
#    -bsequence dna-align/BL05272___rpsU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03785___rpsU-BL05272___rpsU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03785___rpsU-BL05272___rpsU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03785___rpsU
# 2: BL05272___rpsU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     168/174 (96.6%)
# Similarity:   168/174 (96.6%)
# Gaps:           0/174 ( 0.0%)
# Score: 816.0
# 
#
#=======================================

BSNT_03785___      1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL05272___rps      1 ATGTCAAAAACGGTCGTTAGAAAAAACGAATCGCTTGAAGATGCTCTTCG     50

BSNT_03785___     51 TCGCTTCAAACGCAGTGTATCAAAGACAGGTACTTTGCAAGAAGCAAGAA    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BL05272___rps     51 TCGCTTCAAACGCAGTGTATCAAAGACAGGTACTTTGCAGGAAGCAAGAA    100

BSNT_03785___    101 AGCGTGAATTTTATGAAAAACCTAGCGTAAAGCGCAAGAAAAAGTCTGAA    150
                     ||||||||||||||||||||||||||||||..||||||||||||||||||
BL05272___rps    101 AGCGTGAATTTTATGAAAAACCTAGCGTAAGACGCAAGAAAAAGTCTGAA    150

BSNT_03785___    151 GCTGCTAGAAAACGCAAATTCTAA    174
                     |||||.|||||.|||||||.||||
BL05272___rps    151 GCTGCAAGAAAGCGCAAATACTAA    174


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