Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03564 and BL05261

See DNA alignment / Visit BSNT_03564 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_03564___yqjA.1.5803.seq
#    -bsequence pep-align/BL05261___yqjA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03564___yqjA-BL05261___yqjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03564___yqjA-BL05261___yqjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03564___yqjA
# 2: BL05261___yqjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     257/322 (79.8%)
# Similarity:   283/322 (87.9%)
# Gaps:           3/322 ( 0.9%)
# Score: 1322.0
# 
#
#=======================================

BSNT_03564___      1 MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQ     50
                     ||||||||:|||||||.||||:|||.|.||.|.|||||||||:|:|||||
BL05261___yqj      1 MFKIGYRTLKTALGTASAIYIAQLLGLHNFVSTGIITILCIQVTKKRSLQ     50

BSNT_03564___     51 ASWARFAACCLAIVFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGI    100
                     |||||||||.|||||||.|||||||||.|||.:||.|||.||||||.|||
BL05261___yqj     51 ASWARFAACILAIVFSYAFFELIGYHPAVIGLMLLFFIPTTVLLKIKEGI    100

BSNT_03564___    101 VTSSVIILHLYMSGGITLAFIWNEVQLITVGIGVALLMNLYMPSLDRKLI    150
                     |||||||||||||.||||:.:|||..:|..||||||||||||||||::|.
BL05261___yqj    101 VTSSVIILHLYMSEGITLSLVWNEFLIIITGIGVALLMNLYMPSLDKELK    150

BSNT_03564___    151 AYRKKIEDNFAVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRD    200
                     .|::|||||||.||.|||||||||||||:||||||||:||.|||.|||||
BL05261___yqj    151 QYQQKIEDNFAKIFEEIERYLLTGEQDWTGKEIPETHRLINEAKTLAYRD    200

BSNT_03564___    201 VQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMIAEFI    250
                     |:||.||:|||:||||||||||||||||:|||:||||:||:||:|||.|:
BL05261___yqj    201 VENHFLRHENLYYHYFKMREKQFEIIERVLPKITSISMTVEQGQMIAAFL    250

BSNT_03564___    251 HDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG    300
                     ||||.||||||||:||||||..||:|.|||.||.||||||||||||..||
BL05261___yqj    251 HDLRGAIHPGNTAHKFLKRLVKMREEIEEMELPTTREEFEARAALFIFLG    300

BSNT_03564___    301 EMEQYLVIKSYFKGIKAQKSLG    322
                     ||||||||||||||||:..   
BL05261___yqj    301 EMEQYLVIKSYFKGIKSPA---    319


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