Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03552 and BL05260

See DNA alignment / Visit BSNT_03552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_03552___yqzJ.1.5803.seq
#    -bsequence pep-align/BL05260___yqzJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03552___yqzJ-BL05260___yqzJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03552___yqzJ-BL05260___yqzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03552___yqzJ
# 2: BL05260___yqzJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:      52/100 (52.0%)
# Similarity:    69/100 (69.0%)
# Gaps:           7/100 ( 7.0%)
# Score: 291.0
# 
#
#=======================================

BSNT_03552___      1 MDVMTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRVGEQWKSKR     50
                          |.:||.||..||::||||:||||||||||.:|::|..|:.||:||
BL05260___yqz      1 -----MILESFNDAFFLIEFFTIVLPALTAIGIALILKDCSTGDSWKTKR     45

BSNT_03552___     51 TDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVNDEEDAGSLLL--     98
                     .:|:..:..::..|||||:|||||.||.||.||.:..||:||...|||  
BL05260___yqz     46 FEEYHAIQFVSAVDFLIILYHRITVWISKVIRMKASSNDDEDHRFLLLSI     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.