Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03546 and GA1

See DNA alignment / Visit BSNT_03546 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_03546___rpmGA1.1.5803.seq
#    -bsequence pep-align/BL05257___rpmG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03546___rpmGA1-BL05257___rpmG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03546___rpmGA1-BL05257___rpmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03546___rpmGA1
# 2: BL05257___rpmG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 49
# Identity:      44/49 (89.8%)
# Similarity:    48/49 (98.0%)
# Gaps:           0/49 ( 0.0%)
# Score: 242.0
# 
#
#=======================================

BSNT_03546___      1 MRVNVTLACTETGDRNYITTKNKRTNPDRLELKKYSPRLKKYTLHRETK     49
                     |||.:|||||||||||||||||||||||||||||||||||::|:|||||
BL05257___rpm      1 MRVKITLACTETGDRNYITTKNKRTNPDRLELKKYSPRLKRHTIHRETK     49


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