Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03546 and GA1

See Amino acid alignment / Visit BSNT_03546 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence dna-align/BSNT_03546___rpmGA1.1.5803.seq
#    -bsequence dna-align/BL05257___rpmG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03546___rpmGA1-BL05257___rpmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03546___rpmGA1-BL05257___rpmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03546___rpmGA1
# 2: BL05257___rpmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     120/150 (80.0%)
# Similarity:   120/150 (80.0%)
# Gaps:           0/150 ( 0.0%)
# Score: 480.0
# 
#
#=======================================

BSNT_03546___      1 ATGAGAGTAAATGTTACTTTAGCCTGCACTGAAACGGGAGACCGAAATTA     50
                     |||||||||||..||||.||.||.|||||.|||||.||.|||||.|||||
BL05257___rpm      1 ATGAGAGTAAAAATTACATTGGCGTGCACCGAAACAGGGGACCGCAATTA     50

BSNT_03546___     51 CATCACAACAAAAAATAAACGCACCAATCCAGACCGTTTGGAGCTGAAAA    100
                     .||.||.||||||||.||||||||.|||||.||.||..||||..||||||
BL05257___rpm     51 TATTACGACAAAAAACAAACGCACAAATCCGGATCGCCTGGAATTGAAAA    100

BSNT_03546___    101 AATATTCACCGCGTTTAAAGAAATATACCCTTCACCGTGAAACAAAATAA    150
                     |||||||.||||||.|.||.|...|.||..||||||||||||||||||||
BL05257___rpm    101 AATATTCTCCGCGTCTGAAAAGGCACACGATTCACCGTGAAACAAAATAA    150


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