Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03511 and BL05253
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence pep-align/BSNT_03511___nudF.1.5803.seq
# -bsequence pep-align/BL05253___nudF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03511___nudF-BL05253___nudF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03511___nudF-BL05253___nudF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03511___nudF
# 2: BL05253___nudF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 149/188 (79.3%)
# Similarity: 173/188 (92.0%)
# Gaps: 3/188 ( 1.6%)
# Score: 769.0
#
#
#=======================================
BSNT_03511___ 1 ---MKSLEEKTIAKEQIFSGKVIDLYVEDVELPNGKASKREIVKHPGAVA 47
:|.||||||:||::|||||||||:|||||||||..||||||||||||
BL05253___nud 1 MIKLKHLEEKTISKEKLFSGKVIDLYLEDVELPNGKTGKREIVKHPGAVA 50
BSNT_03511___ 48 VLAVTDEGKIIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEET 97
|||:|||..||:|||:||.|||||||||||||||||:|||||||||||||
BL05253___nud 51 VLALTDEENIILVKQYRKALERTIVEIPAGKLEKGEKPEYTALRELEEET 100
BSNT_03511___ 98 GYTAKKLTKITAFYTSPGFADEIVHVFLAEELSVLEEKRELDEDEFVEVM 147
||||.||.||||||||||||||:||::|||||:.|||||||||||||||:
BL05253___nud 101 GYTAAKLEKITAFYTSPGFADELVHLYLAEELTPLEEKRELDEDEFVEVL 150
BSNT_03511___ 148 EVTLEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK 185
||.|..||||:|::::||||||||:|||:|::||||:|
BL05253___nud 151 EVPLSGALKLMETQDIYDAKTAYAVQYLELRKALQAKK 188
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