Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02107 and BL05244
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence pep-align/BSNT_02107___rapA.1.5803.seq
# -bsequence pep-align/BL05244.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02107___rapA-BL05244.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02107___rapA-BL05244.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02107___rapA
# 2: BL05244
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 202/376 (53.7%)
# Similarity: 273/376 (72.6%)
# Gaps: 0/376 ( 0.0%)
# Score: 1054.0
#
#
#=======================================
BSNT_02107___ 1 MKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLL 50
|...|||:.||:|||:||..||:|:|.:||.:|.|:||||..||||||||
BL05244 1 MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLL 50
BSNT_02107___ 51 LYYSLMEFRHRVMLDYIKPFGEDTSQLEFSELLEDIEGNQYKLTGLLEYY 100
|||:|||||||:||||:||..|..:..:|||:|:|||..|.|||||||||
BL05244 51 LYYALMEFRHRIMLDYVKPLEEGETPPDFSEILKDIEDEQGKLTGLLEYY 100
BSNT_02107___ 101 FNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFY 150
|||||||||:|...::.|:.:|:||||.|..|.|:||:|||.|||||:||
BL05244 101 FNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFY 150
BSNT_02107___ 151 NLKQTYVSMSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERAL 200
::||::|||:||:||:||||.:||||||||||||||||||||::..|:||
BL05244 151 HMKQSHVSMNYALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKAL 200
BSNT_02107___ 201 PHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQKAAEYFEKSVSIC 250
.|||.||.|:::||...|.....|||||||.|||:..:|||||.::.:|.
BL05244 201 SHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAAEYFNRAAAIY 250
BSNT_02107___ 251 KSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVEL 300
:.|..|.||.:.:||....:|.|...:|.....:|::|||:..|.:::..
BL05244 251 QEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSK 300
BSNT_02107___ 301 FQFLHALYGKNIDTESVSHTFQFLEEHMLYPYIEELAHDAAQFYIENGQP 350
|.||.|||..:.....:..|||.|....:||.||:||.:||::|.|.|:.
BL05244 301 FHFLKALYVDDDGRAPMLETFQLLGSKKMYPDIEDLALEAAEYYNEIGRL 350
BSNT_02107___ 351 EKALSFYEKMVHAQKQIQRGDCLYEI 376
..::.||:.:..|:||:::||..|||
BL05244 351 SDSVYFYQTVFSARKQMKKGDWSYEI 376
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