Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03430 and BL05240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:24
# Commandline: needle
# -asequence pep-align/BSNT_03430___ypaA.1.5803.seq
# -bsequence pep-align/BL05240.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03430___ypaA-BL05240.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03430___ypaA-BL05240.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03430___ypaA
# 2: BL05240
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 118/194 (60.8%)
# Similarity: 145/194 (74.7%)
# Gaps: 6/194 ( 3.1%)
# Score: 587.0
#
#
#=======================================
BSNT_03430___ 1 ---MKVKKLVVVSMLSSIAFVLMLLNFPFPGLPDYLKIDFSDVPAIIAIL 47
.||::||.:||||||||:||:|:||..|...||||||||:||::|::
BL05240 1 MKHNKVRRLVSISMLSSIAFILMMLSFPILGAFPYLKIDFSDIPALLAVI 50
BSNT_03430___ 48 IYGPLAGIAVEAIKNVPQYIIQGSMAGVPVGQVANFIAGTLFILPTAFLF 97
:|||.|||||||||||..|.|.||.:|||:.|.||||||||||||.|.|.
BL05240 51 LYGPGAGIAVEAIKNVLNYFIAGSASGVPIDQAANFIAGTLFILPAAVLL 100
BSNT_03430___ 98 KKLNSAKGLAVSLLLGTAAMTILMSILNYVLILPAYTWFLHSPALSDSAL 147
||.:||||...:|..||..|.:.||||||:|.||||||||::|||:..||
BL05240 101 KKSSSAKGFVTALFAGTLVMAVSMSILNYLLFLPAYTWFLNAPALTGEAL 150
BSNT_03430___ 148 KTAVVAGILPFNMIKGIVITVVFSLIFIKLKPWI-EQQRSAHIH 190
||.|:|||||||.||||.:.:|.:.||:.|||.: |..|.|.
BL05240 151 KTTVLAGILPFNFIKGIAVALVSTPIFLSLKPRLKENVRMAK-- 192
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