Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03400 and BL05238

See DNA alignment / Visit BSNT_03400 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03400.1.5803.seq
#    -bsequence pep-align/BL05238.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03400-BL05238.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03400-BL05238.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03400
# 2: BL05238
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 43
# Identity:      28/43 (65.1%)
# Similarity:    30/43 (69.8%)
# Gaps:           0/43 ( 0.0%)
# Score: 130.0
# 
#
#=======================================

BSNT_03400         1 MGKDRQEKKLKASGRVESDRDQSIHYDGATSLEQNGRFKKRKS     43
                     |||||||||||...|.||||||||.|:||.|||.....:||..
BL05238            1 MGKDRQEKKLKQQKRTESDRDQSISYNGAASLESAEDARKRNP     43


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.