Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03400 and BL05238

See Amino acid alignment / Visit BSNT_03400 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence dna-align/BSNT_03400.1.5803.seq
#    -bsequence dna-align/BL05238.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03400-BL05238.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03400-BL05238.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03400
# 2: BL05238
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      89/148 (60.1%)
# Similarity:    89/148 (60.1%)
# Gaps:          32/148 (21.6%)
# Score: 254.5
# 
#
#=======================================

BSNT_03400         1 ATGGGAAAAGACAGACAAGAGAAAAAACTCAAAGCTTCAGGCA-----GA     45
                     .||||||||||||||||.||.||.||.||.|||    || |||     ||
BL05238            1 TTGGGAAAAGACAGACAGGAAAAGAAGCTGAAA----CA-GCAGAAGCGA     45

BSNT_03400        46 GTCGAATCAGACCGCGACCAGTCCATTCACTATGACGGAGCGACAA----     91
                     ..||||||.|||||.||||||||.||           .|||.||||    
BL05238           46 ACCGAATCGGACCGTGACCAGTCGAT-----------CAGCTACAATGGC     84

BSNT_03400        92 ---GCCTTGAACAAAA---CGGAAGATTC-AAAAAGCGAAAATCATAA    132
                        ||||....|.|||   ||||.||..| ...||||||||..|.|||
BL05238           85 GCCGCCTCTCTCGAAAGTGCGGAGGACGCGCGCAAGCGAAACCCGTAA    132


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