Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03400 and BL05238
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03400.1.5803.seq
# -bsequence dna-align/BL05238.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03400-BL05238.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03400-BL05238.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03400
# 2: BL05238
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity: 89/148 (60.1%)
# Similarity: 89/148 (60.1%)
# Gaps: 32/148 (21.6%)
# Score: 254.5
#
#
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BSNT_03400 1 ATGGGAAAAGACAGACAAGAGAAAAAACTCAAAGCTTCAGGCA-----GA 45
.||||||||||||||||.||.||.||.||.||| || ||| ||
BL05238 1 TTGGGAAAAGACAGACAGGAAAAGAAGCTGAAA----CA-GCAGAAGCGA 45
BSNT_03400 46 GTCGAATCAGACCGCGACCAGTCCATTCACTATGACGGAGCGACAA---- 91
..||||||.|||||.||||||||.|| .|||.||||
BL05238 46 ACCGAATCGGACCGTGACCAGTCGAT-----------CAGCTACAATGGC 84
BSNT_03400 92 ---GCCTTGAACAAAA---CGGAAGATTC-AAAAAGCGAAAATCATAA 132
||||....|.||| ||||.||..| ...||||||||..|.|||
BL05238 85 GCCGCCTCTCTCGAAAGTGCGGAGGACGCGCGCAAGCGAAACCCGTAA 132
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