Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03303 and BL05236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03303.1.5803.seq
# -bsequence pep-align/BL05236___ypsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03303-BL05236___ypsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03303-BL05236___ypsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03303
# 2: BL05236___ypsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 137/212 (64.6%)
# Similarity: 159/212 (75.0%)
# Gaps: 31/212 (14.6%)
# Score: 729.0
#
#
#=======================================
BSNT_03303 1 MENVQLDGVNNAAQQMGPTGAPFFKAGEMMKVLAITGYKPFELGIFKQDD 50
|||||:||||||||||||.||
BL05236___yps 1 -----------------------------MKVLAVTGYKPFELGIFKHDD 21
BSNT_03303 51 KALYYIKKAIKNRLIAFLDEGLEWILISGQLGVELWAAEVAYDLQEEYPD 100
|||:|||||::||:||.|:|||||:|||||||.||||||||:.||||:||
BL05236___yps 22 KALFYIKKALENRMIALLEEGLEWVLISGQLGTELWAAEVAFSLQEEFPD 71
BSNT_03303 101 LKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQ 150
|||||||||.||||.|.|.|:||||||||.:|:..||||||||||:||||
BL05236___yps 72 LKVAVITPFLEQEKKWSEKNQEQYEAVLAASDFTESLTHRPYESPVQFKQ 121
BSNT_03303 151 KNQFFIDKSDGLLLLYDLEKEGSPKYMLGSAEKRREQDGYPIYFITMDDL 200
||:|||:|:||||:|||.|.||||.|||..|:|.:|:..:|||.||||||
BL05236___yps 122 KNRFFIEKADGLLILYDEEIEGSPVYMLNEAKKAQEKRDFPIYTITMDDL 171
BSNT_03303 201 RVTVEEDSYS-- 210
||||||.|:.
BL05236___yps 172 RVTVEECSFYEE 183
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