Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03301 and BL05234
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03301___ypsC.1.5803.seq
# -bsequence pep-align/BL05234___ypsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03301___ypsC-BL05234___ypsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03301___ypsC-BL05234___ypsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03301___ypsC
# 2: BL05234___ypsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 304/385 (79.0%)
# Similarity: 337/385 (87.5%)
# Gaps: 2/385 ( 0.5%)
# Score: 1636.0
#
#
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BSNT_03301___ 1 MKKYTLIATAPMGIEAVVAKEVRDLGYECKVDNGKVIFEGDALAICRANL 50
||.|||||||||||||:||||||||||:|.||||||:|||||||||||||
BL05234___yps 1 MKTYTLIATAPMGIEAIVAKEVRDLGYDCTVDNGKVVFEGDALAICRANL 50
BSNT_03301___ 51 WLRTADRIKVQVASFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVK 100
|||||||:|||.|.|.||||||||||||||:|.:::||:..|||.|||||
BL05234___yps 51 WLRTADRVKVQAAEFIAKTFDELFEKTKAIDWSAYLPEHASFPVTGKSVK 100
BSNT_03301___ 101 STLASVPDCQRIVKKAIVEKLKLQSGKANDWIEETGAEYKVEISLLKDQA 150
|.|||||||||||||||.||||.:.....:|:||||.|||:|:|||||:|
BL05234___yps 101 SVLASVPDCQRIVKKAIAEKLKSEYQTQGEWLEETGPEYKIEVSLLKDKA 150
BSNT_03301___ 151 LITLDSSGTGLHKRGYRVDQGGAPIKETLAAALVQLTNWTPDRPFVDPFC 200
:|||||||.||||||||..||.||:||||||||:.|||||||||||||||
BL05234___yps 151 VITLDSSGAGLHKRGYRTGQGEAPLKETLAAALILLTNWTPDRPFVDPFC 200
BSNT_03301___ 201 GSGTIAIEAALIGQNIAPGFNRDFVSEDWEWIGKDLWNKARLEVEEKANY 250
|||||.||||||||||||||||||.||.||||||::|::|||||||||||
BL05234___yps 201 GSGTIPIEAALIGQNIAPGFNRDFASERWEWIGKEVWDQARLEVEEKANY 250
BSNT_03301___ 251 DQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTTNLEFGV 300
||||:|...|:||||::|||.|||||||.|.|:|||||||||.|..|:||
BL05234___yps 251 DQPLSISGYDLDHRMIEIAKANAEEAGLADFIEFKQMQVKDFRTKEEYGV 300
BSNT_03301___ 301 IVGNPPYGERLGEKKAVEQMYKEMGQAFEPLDTWSVYMLTSNENFEEAYG 350
||||||||||||||||||.|||:||:||..|||||||||||||.|||.||
BL05234___yps 301 IVGNPPYGERLGEKKAVEAMYKDMGKAFAELDTWSVYMLTSNERFEECYG 350
BSNT_03301___ 351 RKATKKRKLFNGFIKTDYYQYWSKVRPQRKKTENA 385
:|||||||||||||||||||||.|..|:..|.:
BL05234___yps 351 KKATKKRKLFNGFIKTDYYQYWGKRPPKPNKEK-- 383
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