Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03271 and BL05227

See DNA alignment / Visit BSNT_03271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence pep-align/BSNT_03271___degR.1.5803.seq
#    -bsequence pep-align/BL05227___degR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03271___degR-BL05227___degR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03271___degR-BL05227___degR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03271___degR
# 2: BL05227___degR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      42/60 (70.0%)
# Similarity:    53/60 (88.3%)
# Gaps:           0/60 ( 0.0%)
# Score: 229.0
# 
#
#=======================================

BSNT_03271___      1 MDDKDLKLILHKTFIEIYSDLEELADIAKKGKPSMEKYVEEIEQRCKQNI     50
                     |:..:|:.:|||||:|:|.|||:|.||||||:||:||.:||||||.||||
BL05227___deg      1 MESNELQTVLHKTFVEVYKDLEQLVDIAKKGRPSLEKNIEEIEQRLKQNI     50

BSNT_03271___     51 LAIEIQMKIK     60
                     ||||||:|||
BL05227___deg     51 LAIEIQLKIK     60


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