Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03257 and BL05224

See DNA alignment / Visit BSNT_03257 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:55
# Commandline: needle
#    -asequence pep-align/BSNT_03257___yphP.1.5803.seq
#    -bsequence pep-align/BL05224___yphP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03257___yphP-BL05224___yphP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03257___yphP-BL05224___yphP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: BL05224___yphP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     115/144 (79.9%)
# Similarity:   126/144 (87.5%)
# Gaps:           0/144 ( 0.0%)
# Score: 591.0
# 
#
#=======================================

BSNT_03257___      1 MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVN     50
                     ||.||||||||||:|||:||..|||:|||||||||.|||.|||||.||||
BL05224___yph      1 MSTAYEEYMRQLVLPMRQELVQAGFKELTTAEEVETFMEDAEGTTFVVVN     50

BSNT_03257___     51 SVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQ    100
                     ||||||||||||||.|||..::|.||.|||||||||:||||||||||.|.
BL05224___yph     51 SVCGCAAGLARPAAVQAVSGSEKGPDETVTVFAGQDREATAKMREYFEGY    100

BSNT_03257___    101 EPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMRNLTAAFDAHC    144
                     |||||||||||||||||||||.:|||.:|.|||:|:|.||:.||
BL05224___yph    101 EPSSPSMALLKGKEVVHFIPREQIEGREMTEIMKNITDAFEKHC    144


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.