Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03257 and BL05224
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence dna-align/BSNT_03257___yphP.1.5803.seq
# -bsequence dna-align/BL05224___yphP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03257___yphP-BL05224___yphP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03257___yphP-BL05224___yphP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: BL05224___yphP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 324/440 (73.6%)
# Similarity: 324/440 (73.6%)
# Gaps: 10/440 ( 2.3%)
# Score: 1153.0
#
#
#=======================================
BSNT_03257___ 1 ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCG 50
|||||||..|||||||||||||||||||||||||||||..|.||||||||
BL05224___yph 1 ATGTCAACAGCTTATGAAGAATACATGCGCCAGCTTGTTCTTCCGATGCG 50
BSNT_03257___ 51 CCGCGAGCTGACTGGAGCA----GGTTTTGAAGAGTTAACAACAGCGGAA 96
.|..|| |.|||.||| ||.|||.||||||||||.||.||||||
BL05224___yph 51 TCAGGA----ATTGGTGCAGGCCGGCTTTAAAGAGTTAACGACCGCGGAA 96
BSNT_03257___ 97 GAAGTAGAAAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGT 146
|||||.||.|..||.||||||.|.|||||.|||||.|||.|.||.|||||
BL05224___yph 97 GAAGTGGAGACATTCATGGAAGACGCAGAAGGCACGACTTTCGTCGTCGT 146
BSNT_03257___ 147 TAACTCTGTATGCGGCTGTGCGGCAGGCCTTGCGCGTCCTGCGGCTACAC 196
.|||||.||.|||||.|||||.|||||.||.|||||.||.||.||....|
BL05224___yph 147 CAACTCAGTCTGCGGATGTGCCGCAGGGCTGGCGCGACCGGCAGCCGTTC 196
BSNT_03257___ 197 AGGCAGTCCTCCAGAA-TGACAAAACACCTGACAATACGGTGACTGTTTT 245
||||.|| ||||.||| .||.|||...||||||.|.||.||.||.|||||
BL05224___yph 197 AGGCCGT-CTCCGGAAGCGAAAAAGGGCCTGACGAGACCGTTACAGTTTT 245
BSNT_03257___ 246 TGCGGGCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACTG 295
|||.||.||.|||...|||||.||.||.||||||.|.||.||.||....|
BL05224___yph 246 TGCCGGACAGGATCGTGAAGCAACGGCAAAAATGAGGGAATACTTCGAAG 295
BSNT_03257___ 296 GCCAGGAGCCTTCTTCACCATCAATGGCTCTTTTGAAAGGCAAAGAAGTC 345
|..|.||.||.||||||||.||||||||.||..|||||||||||||||||
BL05224___yph 296 GATATGAACCGTCTTCACCTTCAATGGCACTGCTGAAAGGCAAAGAAGTC 345
BSNT_03257___ 346 GTACATTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAAT 395
||.|||||.|||||||||.|..|.||||||||.|..||.|||...||.||
BL05224___yph 346 GTTCATTTCATTCCGCGTGAACAGATTGAAGGCCGTGAAATGACGGAGAT 395
BSNT_03257___ 396 TATGAGAAATCTGACTGCTGCCTTCGATGCGCACTGCTAA 435
|||||.|||..|.||.|..||.||.||....||.||||||
BL05224___yph 396 TATGAAAAACATTACGGACGCTTTTGAAAAACATTGCTAA 435
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