Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03245 and BL05223

See DNA alignment / Visit BSNT_03245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03245___ypmP.1.5803.seq
#    -bsequence pep-align/BL05223___ypmP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03245___ypmP-BL05223___ypmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03245___ypmP-BL05223___ypmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03245___ypmP
# 2: BL05223___ypmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      48/83 (57.8%)
# Similarity:    63/83 (75.9%)
# Gaps:           0/83 ( 0.0%)
# Score: 260.0
# 
#
#=======================================

BSNT_03245___      1 MLLKSLEFKRDDGIQVKVTEIPVLKEDEHYFFMLHHHLQFYLKEVFSSNS     50
                     ||||||||||.||.:|||||||:||||:.:|||.:..|:.:||.::.|..
BL05223___ypm      1 MLLKSLEFKRSDGQKVKVTEIPLLKEDDPHFFMANLRLEIFLKTLYCSKR     50

BSNT_03245___     51 RAKVYSFRHYMKRRMKWADYQAVFHQEVLKHNA     83
                     :..|||||.|:||.:||.||.|::..:.|||||
BL05223___ypm     51 KKNVYSFRDYLKRALKWQDYLAIYQHDELKHNA     83


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.