Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03240 and BL05222

See DNA alignment / Visit BSNT_03240 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_03240___ypmT.1.5803.seq
#    -bsequence pep-align/BL05222___ypmT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03240___ypmT-BL05222___ypmT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03240___ypmT-BL05222___ypmT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03240___ypmT
# 2: BL05222___ypmT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      38/66 (57.6%)
# Similarity:    45/66 (68.2%)
# Gaps:           2/66 ( 3.0%)
# Score: 197.0
# 
#
#=======================================

BSNT_03240___      1 MKRIYQYFSLLSFTFSLYFGWLAYHHLAAEDMDQMYLNVSYCALFLSVMV     50
                     |:|||.||||||..||||||.||......|:||:||||:.|||||||:|:
BL05222___ypm      1 MERIYTYFSLLSMLFSLYFGGLAAFSFVDENMDKMYLNIGYCALFLSIMI     50

BSNT_03240___     51 FTFGMRDRKKPDKS--     64
                     ||...:..||.|..  
BL05222___ypm     51 FTLDAKKHKKTDHHNQ     66


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