Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03184 and BL05217

See DNA alignment / Visit BSNT_03184 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence pep-align/BSNT_03184.1.5803.seq
#    -bsequence pep-align/BL05217.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03184-BL05217.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03184-BL05217.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03184
# 2: BL05217
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     138/288 (47.9%)
# Similarity:   180/288 (62.5%)
# Gaps:          24/288 ( 8.3%)
# Score: 624.5
# 
#
#=======================================

BSNT_03184         1 ----------------MTVQDICIHLGISRSSYYRWKKNLKKDHPKRHLE     34
                                     ..:.||...|||.:|:||||||..||.. ...||
BL05217            1 MEPRVIVQVVEELSATFKIIDILGVLGIPKSTYYRWKKKYKKVE-LTSLE     49

BSNT_03184        35 KQIGTLCREHQYRYGYRKITAILKKR--MCINHKTVQRIMQKNQWQCRVK     82
                     :.:..||:::.|.||:|||.:||.::  :.:|.||||:||||.:.||:||
BL05217           50 ELVIKLCKKNFYHYGHRKIKSILNRKYGINVNRKTVQKIMQKFEIQCQVK     99

BSNT_03184        83 VKKRKKN--GQPYAVVDNILDRNFQSDHPLEKLVTDITYLPYGQKQLYLS    130
                      |||:|.  |:...:|.|.|:|||::....||.||||||||||...||||
BL05217          100 -KKRQKYICGESNIIVPNTLNRNFKASRLNEKWVTDITYLPYGSTMLYLS    148

BSNT_03184       131 SILDVYNGEVIAFTIGDKQDTDFVLHTLDQLPTL--PENCVLHSDQGSVY    178
                     :|:|:||.|::|:.||..||.:.||.||.:...|  |...:|||||||||
BL05217          149 TIMDLYNNEIVAYKIGTSQDINLVLDTLREAVELRKPVGLLLHSDQGSVY    198

BSNT_03184       179 TSYEYQKAVKTKGITMSMSRKGTPADNASIESFHSSLKSETFYLNSIDRT    228
                     ||:.||...|.||||.||||||...|||.|||||||||||.|...|....
BL05217          199 TSHAYQNLAKEKGITTSMSRKGNCHDNAVIESFHSSLKSEGFNAQSRASI    248

BSNT_03184       229 TTAIVERTVIEYIHYYNNIRIQTKLNNQSPINYRQLAV    266
                     :.:.|.:.|.:|::.||::|||.|||..||:.||..|.
BL05217          249 SNSKVVQIVNQYMYRYNHVRIQAKLNYLSPLEYRGQAA    286


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