Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02197 and BL05199

See DNA alignment / Visit BSNT_02197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_02197.1.5803.seq
#    -bsequence pep-align/BL05199.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02197-BL05199.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02197-BL05199.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02197
# 2: BL05199
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      27/74 (36.5%)
# Similarity:    33/74 (44.6%)
# Gaps:          37/74 (50.0%)
# Score: 138.0
# 
#
#=======================================

BSNT_02197         1 -------------------------------------MEQLIRAIEVNNE     13
                                                          ||.||:.:|.||:
BL05199            1 MYSKWNSETSYPPSAPQMHTGQSSQQMNQRLKNLEDQMELLIKLMESNNQ     50

BSNT_02197        14 LLRTMQEQQNRVCTNGGGSVIVRM     37
                     |||:::||||||||.|||||||||
BL05199           51 LLRSIEEQQNRVCTAGGGSVIVRM     74


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