Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02197 and BL05199
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_02197.1.5803.seq
# -bsequence dna-align/BL05199.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02197-BL05199.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02197-BL05199.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02197
# 2: BL05199
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 77/227 (33.9%)
# Similarity: 77/227 (33.9%)
# Gaps: 115/227 (50.7%)
# Score: 215.0
#
#
#=======================================
BSNT_02197 0 -------------------------------------------------- 0
BL05199 1 ATGTATTCAAAATGGAATTCTGAAACGTCTTATCCGCCTTCAGCCCCGCA 50
BSNT_02197 0 -------------------------------------------------- 0
BL05199 51 AATGCATACCGGTCAATCTTCGCAGCAGATGAACCAAAGGCTGAAAAATC 100
BSNT_02197 1 -----------ATGGAGCAACTAATTAGAGC-GATTGAGGTAAACAATGA 38
|||||....||.||.| ||| .||.||....||||||.|
BL05199 101 TCGAAGATCAAATGGAATTGCTCATCA-AGCTCATGGAAAGCAACAATCA 149
BSNT_02197 39 ATTGCTGAGAACAATGCAAGAACAGCAAAACCGTGTATGCACAAATGGCG 88
..|||||.|..|.||..||||.|||||.||.||.||.|||||....||||
BL05199 150 GCTGCTGCGTTCGATTGAAGAGCAGCAGAATCGCGTCTGCACGGCCGGCG 199
BSNT_02197 89 GCGGGTCTGTGATTGTCCGGATGTAG- 114
||||.||.||.||.|||.|||||| |
BL05199 200 GCGGTTCGGTTATCGTCAGGATGT-GA 225
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